STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_21119COG1846 Transcriptional regulators. (159 aa)    
Predicted Functional Partners:
KYG_21114
Mate efflux family protein; COG0534 Na+-driven multidrug efflux pump.
 
  
 0.720
KYG_21129
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.627
KYG_21124
Phenylacetic acid degradation-like protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.623
KYG_06439
TRAP transporter solute receptor TAXI family protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
  
     0.556
KYG_22546
Hypothetical protein.
  
     0.511
KYG_21134
Ompa/motb domain-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.447
KYG_15810
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
     0.438
KYG_14603
General secretion pathway L.
  
     0.409
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.