STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_21189Hypothetical protein; COG4801 Predicted acyltransferase. (291 aa)    
Predicted Functional Partners:
KYG_12624
COG0067 Glutamate synthase domain 1.
    
  0.795
KYG_17647
Cbb3-type cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.791
KYG_21941
Hypothetical protein.
   
   0.749
KYG_09275
COG3256 Nitric oxide reductase large subunit.
  
 0.728
KYG_02237
Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase.
  
 
 0.681
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.671
KYG_03396
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.643
KYG_14298
Oxidoreductase FAD/NAD(P)-binding domain-containing protein; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
    
  0.643
tolB
Translocation protein TolB; COG0823 Periplasmic component of the Tol biopolymer transport system.
   
 
 0.640
KYG_01462
COG2010 Cytochrome c, mono- and diheme variants.
  
 0.635
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.