STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_21389Chromate resistance protein. (316 aa)    
Predicted Functional Partners:
KYG_21394
COG2059 Chromate transport protein ChrA.
 
   
 0.914
KYG_21399
Superoxide dismutase, Fe-Mn family.
 
  
 0.829
KYG_14298
Oxidoreductase FAD/NAD(P)-binding domain-containing protein; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
    
  0.709
prpE
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
       0.509
KYG_14178
COG2175 Probable taurine catabolism dioxygenase.
    
  0.484
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.