STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_21931Hypothetical protein. (314 aa)    
Predicted Functional Partners:
KYG_21936
Globin; COG2346 Truncated hemoglobins.
 
     0.951
KYG_21941
Hypothetical protein.
 
     0.901
KYG_12961
Hypothetical protein.
 
     0.723
KYG_21926
RNA polymerase sigma-70 family protein; COG5343 Uncharacterized protein conserved in bacteria.
 
     0.697
KYG_21921
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.588
KYG_02692
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
  
  0.562
KYG_00045
Putative CheW protein; COG0835 Chemotaxis signal transduction protein.
  
  
  0.561
KYG_08085
Diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
    
  0.489
KYG_14618
General secretion pathway protein I; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.469
KYG_06214
Sigma E regulatory protein, MucB/RseB; COG3026 Negative regulator of sigma E activity.
  
     0.467
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.