STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_22011Major facilitator transporter; COG2223 Nitrate/nitrite transporter. (404 aa)    
Predicted Functional Partners:
KYG_02042
COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.963
KYG_02037
COG1140 Nitrate reductase beta subunit.
 
 
 0.953
KYG_02027
COG2181 Nitrate reductase gamma subunit.
 
 
 0.943
KYG_02047
COG2223 Nitrate/nitrite transporter.
 
  
 
0.926
KYG_22021
Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.852
KYG_22026
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
 
 
 0.820
KYG_02032
Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit.
 
  
 0.813
KYG_22031
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.807
KYG_02052
Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter.
  
  
 
0.761
KYG_00025
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
     
 0.717
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.