STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_23005Hypothetical protein; COG1451 Predicted metal-dependent hydrolase. (321 aa)    
Predicted Functional Partners:
KYG_23000
1-acylglycerol-3-phosphate O-acyltransferase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
    0.891
KYG_22995
Histidinol-phosphate phosphatase family protein; COG0241 Histidinol phosphatase and related phosphatases.
   
   0.771
KYG_23010
Rhodanese domain-containing protein; COG0607 Rhodanese-related sulfurtransferase.
       0.764
glyQ
COG0752 Glycyl-tRNA synthetase, alpha subunit.
  
    0.659
glyS
COG0751 Glycyl-tRNA synthetase, beta subunit.
       0.654
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.464
KYG_22965
CBS domain-containing protein; COG4535 Putative Mg2+ and Co2+ transporter CorC.
       0.460
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.