STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_4Ribose transport system permease protein rbsC. (321 aa)    
Predicted Functional Partners:
rbsA_4
Ribose import ATP-binding protein RbsA.
 
 0.987
rbsB_1
D-ribose-binding periplasmic protein precursor.
 
 0.957
alsB
D-allose-binding periplasmic protein precursor.
 
 0.957
rbsB_2
D-ribose-binding periplasmic protein precursor.
 
 0.956
rbsA_2
Ribose import ATP-binding protein RbsA.
 
 0.949
rbsA_5
Ribose import ATP-binding protein RbsA.
 
 0.948
rbsB_3
D-ribose-binding periplasmic protein precursor.
  
 0.948
rbsA_6
Ribose import ATP-binding protein RbsA.
 
 0.948
rbsA_7
Ribose import ATP-binding protein RbsA.
 
 0.948
rbsA_3
Ribose import ATP-binding protein RbsA.
 
 0.947
Your Current Organism:
uncultured Roseburia sp.
NCBI taxonomy Id: 512314
Other names: u. Roseburia sp.
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.