Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCI15977.1 | SCI50805.1 | SAMEA3545351_00299 | SAMEA3545351_01233 | Exodeoxyribonuclease VII small subunit. | RNA polymerase sigma factor SigF. | 0.555 |
SCI15977.1 | yajC | SAMEA3545351_00299 | SAMEA3545351_02746 | Exodeoxyribonuclease VII small subunit. | Preprotein translocase subunit YajC. | 0.553 |
SCI24264.1 | SCI50805.1 | SAMEA3545351_00578 | SAMEA3545351_01233 | DNA-directed RNA polymerase subunit omega. | RNA polymerase sigma factor SigF. | 0.784 |
SCI24264.1 | SCI50831.1 | SAMEA3545351_00578 | SAMEA3545351_01234 | DNA-directed RNA polymerase subunit omega. | RNA polymerase sigma factor. | 0.728 |
SCI24264.1 | rpoA | SAMEA3545351_00578 | SAMEA3545351_01547 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit alpha. | 0.999 |
SCI24264.1 | rpoB | SAMEA3545351_00578 | SAMEA3545351_01417 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit beta. | 0.999 |
SCI24264.1 | rpoC | SAMEA3545351_00578 | SAMEA3545351_01418 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit beta'. | 0.999 |
SCI24264.1 | rpsO | SAMEA3545351_00578 | SAMEA3545351_00644 | DNA-directed RNA polymerase subunit omega. | 30S ribosomal protein S15. | 0.884 |
SCI50805.1 | SCI15977.1 | SAMEA3545351_01233 | SAMEA3545351_00299 | RNA polymerase sigma factor SigF. | Exodeoxyribonuclease VII small subunit. | 0.555 |
SCI50805.1 | SCI24264.1 | SAMEA3545351_01233 | SAMEA3545351_00578 | RNA polymerase sigma factor SigF. | DNA-directed RNA polymerase subunit omega. | 0.784 |
SCI50805.1 | SCI50831.1 | SAMEA3545351_01233 | SAMEA3545351_01234 | RNA polymerase sigma factor SigF. | RNA polymerase sigma factor. | 0.784 |
SCI50805.1 | rpoA | SAMEA3545351_01233 | SAMEA3545351_01547 | RNA polymerase sigma factor SigF. | DNA-directed RNA polymerase subunit alpha. | 0.813 |
SCI50805.1 | rpoB | SAMEA3545351_01233 | SAMEA3545351_01417 | RNA polymerase sigma factor SigF. | DNA-directed RNA polymerase subunit beta. | 0.848 |
SCI50805.1 | rpoC | SAMEA3545351_01233 | SAMEA3545351_01418 | RNA polymerase sigma factor SigF. | DNA-directed RNA polymerase subunit beta'. | 0.845 |
SCI50805.1 | rpsO | SAMEA3545351_01233 | SAMEA3545351_00644 | RNA polymerase sigma factor SigF. | 30S ribosomal protein S15. | 0.555 |
SCI50805.1 | rsbT | SAMEA3545351_01233 | SAMEA3545351_00608 | RNA polymerase sigma factor SigF. | Serine/threonine-protein kinase rsbT. | 0.643 |
SCI50805.1 | spoIIAB | SAMEA3545351_01233 | SAMEA3545351_01775 | RNA polymerase sigma factor SigF. | Anti-sigma F factor. | 0.643 |
SCI50805.1 | yajC | SAMEA3545351_01233 | SAMEA3545351_02746 | RNA polymerase sigma factor SigF. | Preprotein translocase subunit YajC. | 0.565 |
SCI50831.1 | SCI24264.1 | SAMEA3545351_01234 | SAMEA3545351_00578 | RNA polymerase sigma factor. | DNA-directed RNA polymerase subunit omega. | 0.728 |
SCI50831.1 | SCI50805.1 | SAMEA3545351_01234 | SAMEA3545351_01233 | RNA polymerase sigma factor. | RNA polymerase sigma factor SigF. | 0.784 |
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