Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCI24264.1 | SCI53307.1 | SAMEA3545351_00578 | SAMEA3545351_01330 | DNA-directed RNA polymerase subunit omega. | ATP-dependent helicase HepA. | 0.997 |
SCI24264.1 | SCJ00480.1 | SAMEA3545351_00578 | SAMEA3545351_02364 | DNA-directed RNA polymerase subunit omega. | Bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon. | 0.996 |
SCI24264.1 | cshA | SAMEA3545351_00578 | SAMEA3545351_03138 | DNA-directed RNA polymerase subunit omega. | DEAD-box ATP-dependent RNA helicase CshA. | 0.797 |
SCI24264.1 | dnaN | SAMEA3545351_00578 | SAMEA3545351_00896 | DNA-directed RNA polymerase subunit omega. | DNA polymerase III subunit beta. | 0.575 |
SCI24264.1 | rpoA | SAMEA3545351_00578 | SAMEA3545351_01547 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit alpha. | 0.999 |
SCI24264.1 | rpoB | SAMEA3545351_00578 | SAMEA3545351_01417 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit beta. | 0.999 |
SCI53307.1 | SCI24264.1 | SAMEA3545351_01330 | SAMEA3545351_00578 | ATP-dependent helicase HepA. | DNA-directed RNA polymerase subunit omega. | 0.997 |
SCI53307.1 | SCI53333.1 | SAMEA3545351_01330 | SAMEA3545351_01331 | ATP-dependent helicase HepA. | ASCH domain. | 0.959 |
SCI53307.1 | SCJ00480.1 | SAMEA3545351_01330 | SAMEA3545351_02364 | ATP-dependent helicase HepA. | Bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon. | 0.979 |
SCI53307.1 | cshA | SAMEA3545351_01330 | SAMEA3545351_03138 | ATP-dependent helicase HepA. | DEAD-box ATP-dependent RNA helicase CshA. | 0.945 |
SCI53307.1 | dnaN | SAMEA3545351_01330 | SAMEA3545351_00896 | ATP-dependent helicase HepA. | DNA polymerase III subunit beta. | 0.958 |
SCI53307.1 | polA | SAMEA3545351_01330 | SAMEA3545351_02850 | ATP-dependent helicase HepA. | DNA polymerase I. | 0.996 |
SCI53307.1 | recA | SAMEA3545351_01330 | SAMEA3545351_00272 | ATP-dependent helicase HepA. | Recombinase A. | 0.943 |
SCI53307.1 | rpoA | SAMEA3545351_01330 | SAMEA3545351_01547 | ATP-dependent helicase HepA. | DNA-directed RNA polymerase subunit alpha. | 0.997 |
SCI53307.1 | rpoB | SAMEA3545351_01330 | SAMEA3545351_01417 | ATP-dependent helicase HepA. | DNA-directed RNA polymerase subunit beta. | 0.997 |
SCI53307.1 | udk | SAMEA3545351_01330 | SAMEA3545351_02377 | ATP-dependent helicase HepA. | Uridine kinase. | 0.976 |
SCI53333.1 | SCI53307.1 | SAMEA3545351_01331 | SAMEA3545351_01330 | ASCH domain. | ATP-dependent helicase HepA. | 0.959 |
SCJ00480.1 | SCI24264.1 | SAMEA3545351_02364 | SAMEA3545351_00578 | Bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon. | DNA-directed RNA polymerase subunit omega. | 0.996 |
SCJ00480.1 | SCI53307.1 | SAMEA3545351_02364 | SAMEA3545351_01330 | Bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon. | ATP-dependent helicase HepA. | 0.979 |
SCJ00480.1 | cshA | SAMEA3545351_02364 | SAMEA3545351_03138 | Bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon. | DEAD-box ATP-dependent RNA helicase CshA. | 0.573 |
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