STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCI57714.1Recombinase. (510 aa)    
Predicted Functional Partners:
SCI57643.1
Uncharacterised protein.
 
     0.836
SCI57694.1
Resolvase%2C N terminal domain.
 
    
0.825
SCI57664.1
Recombinase.
 
    
0.758
SCI56843.1
Uncharacterised protein.
  
     0.559
SCI57047.1
Helix-turn-helix domain.
  
     0.504
SCI56520.1
Uncharacterised protein.
  
     0.503
SCI56322.1
Uncharacterised protein.
  
     0.502
SCI56553.1
Protein of uncharacterised function (DUF3801).
  
     0.493
SCI56649.1
Uncharacterised protein.
  
     0.489
iap_4
Probable endopeptidase p60 precursor.
  
     0.479
Your Current Organism:
uncultured Roseburia sp.
NCBI taxonomy Id: 512314
Other names: u. Roseburia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.