STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tig_2Trigger factor. (314 aa)    
Predicted Functional Partners:
rpsG
30S ribosomal protein S7.
   
 
 0.927
rplC
50S ribosomal protein L3.
  
 
 0.903
rpsB
Vegetative protein 209.
   
 
 0.902
rplW
50S ribosomal protein L23.
  
 
 0.902
rpsJ
BS13.
  
 
 0.898
rpmC
50S ribosomal protein L29.
 
 
 0.898
rplU
50S ribosomal protein L21.
 
 
 0.896
rplD
50S ribosomal protein L4.
  
 
 0.896
rpsI
30S ribosomal protein S9.
  
 
 0.896
rplB
50S ribosomal protein L2.
  
   0.894
Your Current Organism:
uncultured Roseburia sp.
NCBI taxonomy Id: 512314
Other names: u. Roseburia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.