STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bdhA_3NADH-dependent butanol dehydrogenase A. (394 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing].
  
    0.783
eutG
Ethanolamine utilization protein EutG.
 
  
 0.749
adhE_1
Aldehyde-alcohol dehydrogenase.
 
 
 0.652
mgsA
Methylglyoxal synthase.
   
 
 0.592
adhE_3
Aldehyde-alcohol dehydrogenase.
 
 
 0.494
dhaT
1%2C3-propanediol dehydrogenase.
  
  
0.487
adhE_2
Aldehyde-alcohol dehydrogenase.
  
  
0.461
aldA
Putative aldehyde dehydrogenase AldA.
 
 
 0.447
SCI99975.1
Uncharacterised protein.
       0.444
SCJ00008.1
Uncharacterised protein.
       0.444
Your Current Organism:
uncultured Roseburia sp.
NCBI taxonomy Id: 512314
Other names: u. Roseburia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.