Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCJ06643.1 | graS_1 | SAMEA3545351_02561 | SAMEA3545351_01511 | FtsX-like permease family. | Sensor histidine kinase graS. | 0.525 |
SCJ06643.1 | graS_2 | SAMEA3545351_02561 | SAMEA3545351_02559 | FtsX-like permease family. | Sensor histidine kinase graS. | 0.941 |
SCJ06643.1 | graS_3 | SAMEA3545351_02561 | SAMEA3545351_02657 | FtsX-like permease family. | Sensor histidine kinase graS. | 0.654 |
SCJ06643.1 | regX3_1 | SAMEA3545351_02561 | SAMEA3545351_02560 | FtsX-like permease family. | Sensory transduction protein regX3. | 0.884 |
arlS | graS_2 | SAMEA3545351_02168 | SAMEA3545351_02559 | Signal transduction histidine-protein kinase ArlS. | Sensor histidine kinase graS. | 0.517 |
arlS | phoR_2 | SAMEA3545351_02168 | SAMEA3545351_00862 | Signal transduction histidine-protein kinase ArlS. | Alkaline phosphatase synthesis sensor protein phoR. | 0.509 |
arlS | regX3_1 | SAMEA3545351_02168 | SAMEA3545351_02560 | Signal transduction histidine-protein kinase ArlS. | Sensory transduction protein regX3. | 0.812 |
arlS | walK_2 | SAMEA3545351_02168 | SAMEA3545351_00618 | Signal transduction histidine-protein kinase ArlS. | Sensor protein kinase walK. | 0.499 |
graS_1 | SCJ06643.1 | SAMEA3545351_01511 | SAMEA3545351_02561 | Sensor histidine kinase graS. | FtsX-like permease family. | 0.525 |
graS_1 | phoR_2 | SAMEA3545351_01511 | SAMEA3545351_00862 | Sensor histidine kinase graS. | Alkaline phosphatase synthesis sensor protein phoR. | 0.407 |
graS_1 | regX3_1 | SAMEA3545351_01511 | SAMEA3545351_02560 | Sensor histidine kinase graS. | Sensory transduction protein regX3. | 0.812 |
graS_1 | walK_2 | SAMEA3545351_01511 | SAMEA3545351_00618 | Sensor histidine kinase graS. | Sensor protein kinase walK. | 0.408 |
graS_2 | SCJ06643.1 | SAMEA3545351_02559 | SAMEA3545351_02561 | Sensor histidine kinase graS. | FtsX-like permease family. | 0.941 |
graS_2 | arlS | SAMEA3545351_02559 | SAMEA3545351_02168 | Sensor histidine kinase graS. | Signal transduction histidine-protein kinase ArlS. | 0.517 |
graS_2 | phoR_2 | SAMEA3545351_02559 | SAMEA3545351_00862 | Sensor histidine kinase graS. | Alkaline phosphatase synthesis sensor protein phoR. | 0.457 |
graS_2 | regX3_1 | SAMEA3545351_02559 | SAMEA3545351_02560 | Sensor histidine kinase graS. | Sensory transduction protein regX3. | 0.978 |
graS_2 | walK_2 | SAMEA3545351_02559 | SAMEA3545351_00618 | Sensor histidine kinase graS. | Sensor protein kinase walK. | 0.442 |
graS_3 | SCJ06643.1 | SAMEA3545351_02657 | SAMEA3545351_02561 | Sensor histidine kinase graS. | FtsX-like permease family. | 0.654 |
graS_3 | phoR_2 | SAMEA3545351_02657 | SAMEA3545351_00862 | Sensor histidine kinase graS. | Alkaline phosphatase synthesis sensor protein phoR. | 0.470 |
graS_3 | regX3_1 | SAMEA3545351_02657 | SAMEA3545351_02560 | Sensor histidine kinase graS. | Sensory transduction protein regX3. | 0.825 |
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