STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCJ20654.1IMP cyclohydrolase. (237 aa)    
Predicted Functional Partners:
purH
Bifunctional purine biosynthesis protein PurH.
 
  
 0.993
purN
Phosphoribosylglycinamide formyltransferase.
   
  0.934
purL
Phosphoribosylformylglycinamidine synthase.
  
 
 0.926
guaB_1
Inosine-5'-monophosphate dehydrogenase.
     
 0.839
guaB_2
Inosine-5'-monophosphate dehydrogenase.
     
 0.839
purD
Phosphoribosylamine--glycine ligase.
  
 
 0.718
SCJ01242.1
Uncharacterised protein.
  
     0.566
srrB
Sensor protein srrB.
       0.523
regX3_2
Sensory transduction protein regX3.
       0.523
SCJ21015.1
Uncharacterised protein.
  
     0.495
Your Current Organism:
uncultured Roseburia sp.
NCBI taxonomy Id: 512314
Other names: u. Roseburia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.