STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCJ33478.1Uncharacterised protein. (374 aa)    
Predicted Functional Partners:
dltB_2
D-alanyl-lipoteichoic acid biosynthesis protein DltB.
 
     0.938
lgrD
Linear gramicidin synthase subunit D.
  
 
 0.820
SCJ33530.1
Uncharacterised protein.
 
    
0.812
acpP_1
Acyl carrier protein.
   
 
 0.790
acpA
Acyl carrier protein.
   
 
 0.790
SCI49378.1
D-alanine--poly(phosphoribitol) ligase subunit 2.
   
 
 0.790
SCI69110.1
Uncharacterised protein.
   
 
 0.790
acpP_2
Acyl carrier protein.
   
 
 0.790
dltB_1
D-alanyl-lipoteichoic acid biosynthesis protein DltB.
 
     0.581
ccpA_2
Catabolite control protein.
       0.553
Your Current Organism:
uncultured Roseburia sp.
NCBI taxonomy Id: 512314
Other names: u. Roseburia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.