STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCT14622.1Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
OCT12575.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.771
OCT15012.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
OCT10909.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
OCT12596.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
OCT11820.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
OCT13599.1
2,5-diketo-D-gluconic acid reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.492
OCT14579.1
6-phospho-beta-glucosidase; Catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
OCT14580.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
OCT14623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
OCT16305.1
Glyoxal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.488
Your Current Organism:
Paenibacillus pectinilyticus
NCBI taxonomy Id: 512399
Other names: CECT 7358, KCTC 13222, P. pectinilyticus, Paenibacillus pectinilyticus Park et al. 2009, Paenibacillus sp. RCB-08, strain RCB-08
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