STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108979612Protein LYK2-like. (678 aa)    
Predicted Functional Partners:
LOC108993633
Leucine-rich repeat receptor-like protein CLAVATA2.
    
 0.719
LOC108990790
DEAD-box ATP-dependent RNA helicase 27-like; Belongs to the DEAD box helicase family.
   
 0.718
LOC109003313
DEAD-box ATP-dependent RNA helicase 27-like.
   
 0.718
LOC109003312
DEAD-box ATP-dependent RNA helicase 27-like.
   
 0.718
LOC109003317
DEAD-box ATP-dependent RNA helicase 27-like; Belongs to the DEAD box helicase family.
   
 0.718
LOC109003314
RNA helicase.
   
 0.718
LOC108987084
Allene oxide cyclase, chloroplastic-like.
      
 0.699
LOC108993644
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.699
LOC109002750
Allene oxide cyclase, chloroplastic-like.
      
 0.699
LOC109001757
Flavin-containing monooxygenase.
      
 0.698
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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