STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108981120Uncharacterized protein LOC108981120. (244 aa)    
Predicted Functional Partners:
LOC108979601
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.509
LOC108987585
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.501
LOC108992797
Uncharacterized protein LOC108992797.
  
     0.498
LOC109021739
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.496
LOC108998118
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.480
LOC108989514
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 
 0.469
LOC108989684
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.445
LOC109021533
Origin of replication complex subunit 5.
    
 
 0.430
LOC109018505
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.427
LOC109001539
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.411
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.