STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108981748FT-interacting protein 1. (796 aa)    
Predicted Functional Partners:
LOC109005940
Chromatin structure-remodeling complex protein SYD isoform X1.
    
 0.612
LOC108996345
Serine/threonine-protein kinase ATG1t.
    
 0.558
LOC109017847
Protein RBL isoform X1.
    
 0.546
LOC109019496
TLC domain-containing protein At5g14285-like.
  
     0.501
LOC109020898
F-box/kelch-repeat protein At1g74510-like.
  
  
  0.501
LOC109013460
TLC domain-containing protein At5g14285-like.
  
     0.500
LOC108983104
Oligopeptide transporter 3.
      
 0.497
LOC109009191
TLC domain-containing protein At5g14285-like.
  
     0.492
LOC108995364
Histone-lysine N-methyltransferase SUVR5-like isoform X1.
   
 0.484
LOC108998182
Histone-lysine N-methyltransferase SUVR5 isoform X1.
   
 0.484
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.