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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108982055DNA helicase INO80-like. (1522 aa)    
Predicted Functional Partners:
LOC109009020
RuvB-like helicase; Belongs to the RuvB family.
    
 0.985
LOC108986152
Actin-related protein 9; Belongs to the actin family.
    
 0.980
LOC108986353
Actin-related protein 5-like isoform X1; Belongs to the actin family.
    
 0.969
LOC109008570
Actin-related protein 5-like isoform X1; Belongs to the actin family.
    
 0.969
LOC109012830
Chromatin-remodeling complex subunit ies6.
    
 0.958
LOC108985640
RuvB-like helicase.
   
 0.944
LOC108988561
RuvB-like helicase; Belongs to the RuvB family.
   
 0.944
LOC108980662
Actin-related protein 4-like.
    
 0.886
LOC108994583
Actin-related protein 4-like isoform X1; Belongs to the actin family.
    
 0.886
LOC109005615
Actin-related protein 4-like; Belongs to the actin family.
    
 0.886
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.