STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108982608Uncharacterized protein LOC108982608. (424 aa)    
Predicted Functional Partners:
LOC108989939
VAN3-binding protein.
  
     0.536
LOC108979695
Uncharacterized protein LOC108979695.
  
     0.523
LOC109007675
Uncharacterized protein LOC109007675.
  
     0.523
LOC109013499
Uncharacterized protein LOC109013499 isoform X1.
  
     0.509
LOC109011893
Uncharacterized protein LOC109011893.
  
     0.504
LOC108990653
Uncharacterized protein LOC108990653.
  
     0.497
LOC108979478
Probable transcription factor At5g28040.
  
     0.495
LOC108998028
LOW QUALITY PROTEIN: uncharacterized protein LOC108998028.
  
     0.494
LOC109001090
F-box/kelch-repeat protein SKIP25-like.
  
     0.493
LOC109014056
Uncharacterized protein LOC109014056.
  
     0.492
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.