Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108984365Serine/threonine-protein kinase PBS1-like; Belongs to the protein kinase superfamily. (468 aa)    
Predicted Functional Partners:
LOC109001320
Serine/threonine-protein kinase CDL1-like isoform X1.
     
  0.914
LOC109004495
Protein SGT1 homolog.
   
 0.697
LOC109018940
Protein HEADING DATE 3A-like.
    
 0.578
LOC109018946
Protein HEADING DATE 3A-like.
    
 0.578
LOC108999261
Protein EDS1L-like.
    
 0.510
LOC109000293
Protein EDS1B-like.
    
 0.510
LOC108992777
Cyclic nucleotide-gated ion channel 18.
      
 0.442
LOC108989413
Heat shock protein 90-5, chloroplastic.
    
 0.441
LOC108987337
Aspartic proteinase-like protein 2 isoform X1; Belongs to the peptidase A1 family.
     
 0.437
LOC109012623
Heat shock protein 90-6, mitochondrial isoform X1.
    
 0.430
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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