STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10898740740S ribosomal protein S13-like; Belongs to the universal ribosomal protein uS15 family. (151 aa)    
Predicted Functional Partners:
LOC109004188
40S ribosomal protein S10-1-like.
   
 0.998
LOC108993887
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.995
LOC108982129
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.991
LOC108992237
40S ribosomal protein S11-like; Belongs to the universal ribosomal protein uS17 family.
  
 0.991
LOC108994828
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.991
LOC108994966
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.991
LOC109008221
40S ribosomal protein S11-like; Belongs to the universal ribosomal protein uS17 family.
  
 0.991
LOC108987408
40S ribosomal protein S20-2.
   
 0.988
LOC109001900
40S ribosomal protein S5-like; Belongs to the universal ribosomal protein uS7 family.
  
 0.988
LOC109011907
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.988
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.