STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108987669Patellin-3-like. (583 aa)    
Predicted Functional Partners:
LOC109008967
Adenosine kinase 2-like.
   
  
 0.509
LOC108990637
E3 ubiquitin-protein ligase RMA1H1-like.
      
 0.503
LOC109011493
Protein PLASTID MOVEMENT IMPAIRED 1.
      
 0.470
LOC109015618
Protein PLASTID MOVEMENT IMPAIRED 1-like.
      
 0.470
LOC109013972
Probable aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.436
LOC108996625
UNC93-like protein 1.
      
 0.418
LOC109011513
E3 ubiquitin-protein ligase RMA1H1-like.
      
 0.403
LOC108980251
Flavin-containing monooxygenase.
      
 0.400
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.