STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10898802814-3-3-like protein A; Belongs to the 14-3-3 family. (264 aa)    
Predicted Functional Partners:
LOC109018940
Protein HEADING DATE 3A-like.
    
 0.815
LOC109018946
Protein HEADING DATE 3A-like.
    
 0.815
LOC109018290
Dual specificity phosphatase Cdc25.
    
 0.759
LOC108983535
Uncharacterized protein LOC108983535.
   
 0.648
LOC109004360
expansin-B3-like; Belongs to the expansin family.
    
 0.605
LOC109020668
expansin-B3; Belongs to the expansin family.
    
 0.605
LOC108982592
E3 ubiquitin-protein ligase UPL5.
    
 0.516
LOC109002860
E3 ubiquitin-protein ligase UPL5-like.
    
 0.516
LOC109007111
E3 ubiquitin-protein ligase UPL5-like.
    
 0.516
LOC109020789
E3 ubiquitin-protein ligase UPL5-like.
    
 0.516
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.