Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108988220Probable receptor-like serine/threonine-protein kinase At4g34500. (523 aa)    
Predicted Functional Partners:
LOC109013085
Uncharacterized protein At2g34460, chloroplastic.
      
 0.653
LOC108998582
Xyloglucan galactosyltransferase XLT2; Belongs to the glycosyltransferase 47 family.
      
 0.632
LOC109014291
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
     
 0.595
LOC109000425
Reticulon-like protein.
      
 0.559
LOC108990348
mannose-P-dolichol utilization defect 1 protein homolog 2-like.
      
 0.556
LOC109010207
mannose-P-dolichol utilization defect 1 protein homolog 2.
      
 0.556
LOC109011599
Uncharacterized protein LOC109011599.
    
 0.529
LOC108989921
Probable aquaporin TIP2-2; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.518
LOC108992064
3-epi-6-deoxocathasterone 23-monooxygenase isoform X1; Belongs to the cytochrome P450 family.
      
 0.502
LOC108985952
Pentatricopeptide repeat-containing protein At5g66520.
      
 0.496
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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