STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108989769Probable caffeoyl-CoA O-methyltransferase At4g26220 isoform X1. (254 aa)    
Predicted Functional Partners:
LOC109010062
cinnamoyl-CoA reductase 1-like.
  
 
  0.906
LOC109010995
cinnamoyl-CoA reductase 1-like isoform X1.
  
 
  0.906
LOC108988663
Feruloyl CoA ortho-hydroxylase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
  0.900
LOC109000614
Feruloyl CoA ortho-hydroxylase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
  0.900
LOC108981066
Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.717
LOC108988452
Chalcone synthase 1; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.717
LOC108992049
Chalcone synthase 2; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.717
LOC108995889
Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.717
LOC109001281
Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.717
LOC108993196
Cytochrome P450 CYP73A100-like; Belongs to the cytochrome P450 family.
   
  
 0.702
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.