STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108990590Protein MOTHER of FT and TFL1-like. (176 aa)    
Predicted Functional Partners:
LOC109004255
UPF0235 protein At5g63440 isoform X1.
    
   0.887
LOC109002322
Uncharacterized protein LOC109002322.
   
 
 0.779
LOC109006410
39S ribosomal protein L46, mitochondrial-like.
   
 
 0.778
LOC108980411
Uncharacterized protein LOC108980411; Belongs to the universal ribosomal protein uS5 family.
   
   0.766
LOC109010669
Uncharacterized protein LOC109010669.
   
   0.754
LOC108993034
Uncharacterized protein LOC108993034; Belongs to the universal ribosomal protein uL16 family.
   
 0.744
LOC109022221
Uncharacterized protein LOC109006880; Belongs to the universal ribosomal protein uL16 family.
   
 0.744
LOC108989041
39S ribosomal protein L41-A, mitochondrial-like.
   
 
 0.739
LOC109002223
Uncharacterized protein LOC109002223; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.736
LOC108983921
28S ribosomal protein S29, mitochondrial-like isoform X1.
   
 
 0.732
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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