STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108991124Uncharacterized protein LOC108991124. (160 aa)    
Predicted Functional Partners:
LOC109002521
Copper-transporting ATPase RAN1-like.
    
 0.464
LOC109006364
Copper-transporting ATPase RAN1-like.
    
 0.464
LOC109006322
Uncharacterized protein At4g06598-like isoform X1.
  
     0.418
LOC108985995
LOW QUALITY PROTEIN: copper-transporting ATPase PAA2, chloroplastic.
    
 0.417
LOC109010549
Copper-transporting ATPase PAA2, chloroplastic-like.
    
 0.417
LOC109010550
Copper-transporting ATPase PAA2, chloroplastic-like.
    
 0.417
LOC109010616
Copper-transporting ATPase PAA2, chloroplastic-like.
    
 0.417
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.