STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108991208Uncharacterized protein LOC108991208. (1018 aa)    
Predicted Functional Partners:
LOC108994638
Nuclear cap-binding protein subunit 1.
    
 0.535
LOC109004657
Uncharacterized protein LOC109004657.
  
     0.516
LOC108990639
Stem-specific protein TSJT1-like.
  
 
 0.502
LOC109011522
Uncharacterized protein LOC109011522.
  
 
 0.474
LOC109022288
Probable small nuclear ribonucleoprotein F.
   
 0.473
LOC108999810
Splicing factor 3B subunit 1.
   
 0.450
LOC109018069
Stem-specific protein TSJT1-like.
  
 
 0.444
LOC108994103
Uncharacterized protein At5g01610-like.
  
     0.438
LOC108986846
Uncharacterized protein At5g01610-like.
  
     0.435
LOC109009582
Uncharacterized protein LOC109009582 isoform X1.
  
     0.432
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.