STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108991476E3 ubiquitin-protein ligase SIS3 isoform X1. (394 aa)    
Predicted Functional Partners:
LOC108985235
Peroxisome biogenesis factor 10.
   
  
 0.517
LOC109005455
Probable E3 ubiquitin-protein ligase XBOS32.
      
 0.487
LOC108996844
GDSL esterase/lipase At4g18970-like.
  
     0.432
LOC108992583
Uncharacterized protein LOC108992583.
  
    0.415
LOC108983413
Stomatal closure-related actin-binding protein 3-like.
  
     0.410
LOC108990166
Uncharacterized protein LOC108990166 isoform X1.
     
 0.410
LOC108997473
Probable E3 ubiquitin-protein ligase RHB1A.
      
 0.404
LOC109016745
Probable E3 ubiquitin-protein ligase RHB1A.
      
 0.404
LOC109003869
Protein MICRORCHIDIA 6.
      
 0.402
LOC109003873
Diphthine methyltransferase homolog.
      
 0.402
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.