STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108992522Transcription repressor MYB6-like. (248 aa)    
Predicted Functional Partners:
LOC108996261
Kinetochore protein Nuf2-like isoform X1.
   
  
 0.714
LOC109007030
Kinetochore protein Nuf2.
   
  
 0.714
LOC108997933
Kinesin-like protein KIN-4C.
   
  
 0.710
LOC109003907
Kinesin-like protein KIN-4C.
   
  
 0.710
LOC109003911
Kinesin-like protein KIN-4C.
   
  
 0.710
LOC108993723
Boron transporter 1-like.
      
 0.697
LOC108999996
Boron transporter 1-like.
      
 0.697
LOC109004147
Boron transporter 1-like.
      
 0.697
LOC108995942
Exocyst complex component EXO84B-like.
      
 0.696
LOC109013836
Exocyst complex component EXO84B-like.
      
 0.696
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.