STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108993563Protein indeterminate-domain 2-like isoform X1. (282 aa)    
Predicted Functional Partners:
LOC108984522
High mobility group B protein 9 isoform X1.
    
 0.522
LOC108985992
High mobility group B protein 10 isoform X1.
    
 0.522
LOC109003447
High mobility group B protein 15-like.
    
 0.522
LOC109022030
High mobility group B protein 15-like isoform X1.
    
 0.522
LOC108982786
Uncharacterized protein LOC108982786 isoform X1.
   
  0.518
LOC109005940
Chromatin structure-remodeling complex protein SYD isoform X1.
    
 0.514
LOC108996345
Serine/threonine-protein kinase ATG1t.
   
 
 0.509
LOC109002551
Protein WVD2-like 7 isoform X1.
  
 0.505
LOC108979291
Uncharacterized protein LOC108979291.
  
     0.504
LOC109006181
Uncharacterized protein LOC109006181.
  
     0.492
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.