STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108994406Nuclear transcription factor Y subunit C-1-like. (226 aa)    
Predicted Functional Partners:
LOC108983738
DNA polymerase epsilon subunit 3.
    
 0.861
LOC108982084
Nuclear transcription factor Y subunit B-3-like.
  
 0.726
LOC109000722
Nuclear transcription factor Y subunit B-3-like.
  
 0.724
LOC108996185
Nuclear transcription factor Y subunit B-1.
  
 0.712
LOC109018710
Nuclear transcription factor Y subunit B-3-like.
  
 0.709
LOC108981201
Nuclear transcription factor Y subunit B-1-like isoform X2.
  
 0.708
LOC108985357
Nuclear transcription factor Y subunit B-9-like.
  
 0.698
LOC109002230
Nuclear transcription factor Y subunit B-1-like.
  
 0.676
LOC109008060
Nuclear transcription factor Y subunit B-4-like.
  
 0.675
LOC109020825
Nuclear transcription factor Y subunit B-4-like.
  
 0.675
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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