STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108994750Vesicle-associated membrane protein 724-like; Belongs to the synaptobrevin family. (221 aa)    
Predicted Functional Partners:
LOC108992757
Vacuolar protein-sorting-associated protein 33 homolog isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.722
LOC108994650
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.673
LOC108984872
Putative SNAP25 homologous protein SNAP30.
    
 0.565
LOC109011467
SNAP25 homologous protein SNAP33-like.
    
 0.565
LOC109021228
SNAP25 homologous protein SNAP33-like.
    
 0.565
LOC108997509
Syntaxin-112.
    
 0.536
LOC109015947
Syntaxin-112-like.
    
 0.536
LOC109020731
Syntaxin-112-like; Belongs to the syntaxin family.
    
 0.536
LOC108987263
Syntaxin-124; Belongs to the syntaxin family.
    
 0.529
LOC109003227
Vesicle transport v-SNARE 12.
    
 
 0.524
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.