STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108995040Serine/threonine-protein kinase RUNKEL. (1368 aa)    
Predicted Functional Partners:
LOC108986673
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
0.616
LOC109012783
Pentatricopeptide repeat-containing protein At4g39530.
      
 0.563
LOC108998604
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.536
LOC109010674
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.536
LOC108987390
UMP-CMP kinase isoform X1; Belongs to the adenylate kinase family.
      
 0.465
LOC109010050
BEACH domain-containing protein C2 isoform X1.
  
   
 0.425
LOC108985045
DNA polymerase eta isoform X1.
   
  
 0.424
LOC108987183
Zinc-finger homeodomain protein 6.
      
 0.416
LOC108984437
Uncharacterized protein LOC108984437 isoform X1.
    
 0.412
LOC109015931
Protein NAP1-like.
  
     0.410
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.