STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108995072Uncharacterized protein At4g15545 isoform X1. (347 aa)    
Predicted Functional Partners:
LOC109012800
ACT domain-containing protein ACR11 isoform X1.
      
 0.556
LOC109002305
Multiple organellar RNA editing factor 1, mitochondrial.
    
 
 0.535
LOC108998635
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.499
LOC108996191
Methylthioribose kinase-like.
      
 0.487
LOC108993592
c-Myc-binding protein homolog.
    
 
 0.423
LOC109019851
c-Myc-binding protein homolog.
    
 
 0.423
LOC108979722
LIM domain-containing protein WLIM1-like.
      
 0.406
LOC109012374
LIM domain-containing protein WLIM1.
      
 0.406
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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