Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108995358Wall-associated receptor kinase-like 14. (696 aa)    
Predicted Functional Partners:
LOC109012894
Protein RTF2 homolog.
    
 
 0.671
LOC108994600
Ubiquitin-conjugating enzyme E2 20-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.586
LOC108986610
Uncharacterized protein LOC108986610.
    
 0.508
LOC108982083
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.505
LOC109021705
Metal-nicotianamine transporter YSL1-like.
    
 
 0.502
LOC109007694
Glutamic acid-rich protein-like.
      
 0.497
LOC109009121
Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic.
      
 0.497
LOC108979861
Arabinogalactan peptide 13-like.
      
 0.451
LOC108986541
DELLA protein GAIP-like; Belongs to the GRAS family.
      
 0.451
LOC109003553
Arabinogalactan peptide 13-like.
      
 0.451
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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