STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108997112Uncharacterized protein LOC108997112 isoform X1. (795 aa)    
Predicted Functional Partners:
LOC108998832
Uncharacterized protein LOC108998832.
      
 0.578
LOC109013560
Pentatricopeptide repeat-containing protein At1g13040, mitochondrial.
      
 0.519
LOC108992432
Uncharacterized protein LOC108992432.
    
 0.459
LOC109005472
Uncharacterized protein LOC109005472.
    
 0.459
LOC109013534
Uncharacterized protein LOC109013534 isoform X1.
    
 0.446
LOC109012625
Uncharacterized protein LOC109012625 isoform X1.
  
 
  0.403
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.