STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108998039Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (281 aa)    
Predicted Functional Partners:
LOC108995472
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.729
LOC108998138
Photosystem II stability/assembly factor HCF136, chloroplastic.
    
 0.563
LOC108989592
Vacuolar protein sorting-associated protein 26A.
    
 
 0.561
LOC109006950
Vacuolar protein sorting-associated protein 26A-like isoform X1.
    
 
 0.561
LOC109007554
Vacuolar protein sorting-associated protein 26B-like.
    
 
 0.561
LOC108986342
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.508
LOC108997380
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
     
 0.469
LOC109009524
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
     
 0.469
LOC108997701
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.447
LOC109006602
Uncharacterized protein LOC109006602.
   
 
 0.447
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.