STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108998488Ras-related protein Rab11C-like. (217 aa)    
Predicted Functional Partners:
LOC109001960
Kinesin-like calmodulin-binding protein isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.816
LOC108996221
Phosphatidylinositol 4-kinase beta 1-like isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.636
LOC109008905
Phosphatidylinositol 4-kinase beta 1-like isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.636
LOC108991329
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.627
LOC108984898
Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.
    
 0.597
LOC108989148
E3 ubiquitin-protein ligase KEG isoform X1.
   
 0.581
LOC109007340
E3 ubiquitin-protein ligase KEG-like.
   
 0.581
LOC109008449
Uncharacterized protein LOC109008449.
    
 0.564
LOC108989238
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.553
LOC109005027
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.553
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.