STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108998918Uncharacterized protein LOC108998918. (367 aa)    
Predicted Functional Partners:
LOC109013492
Myosin-binding protein 7-like.
  
  
  0.519
LOC109019298
Uncharacterized protein LOC109019298.
  
     0.513
LOC108986248
Uncharacterized protein LOC108986248.
  
     0.512
LOC109011897
Myosin-binding protein 7-like.
  
  
  0.512
LOC108988297
Uncharacterized protein LOC108988297.
  
     0.508
LOC109009952
Intracellular protein transport protein USO1-like.
  
     0.505
LOC109005147
UPF0481 protein At3g47200-like.
  
     0.503
LOC108997922
UPF0481 protein At3g47200-like.
  
     0.502
LOC109005798
Uncharacterized protein LOC109005798.
  
     0.502
LOC109013049
Uncharacterized protein LOC109013049.
  
     0.497
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.