STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108999808Chloride channel protein CLC-b-like. (675 aa)    
Predicted Functional Partners:
LOC108986085
Chloride channel protein.
  
 
 
 0.573
LOC108982925
Eukaryotic initiation factor 4A.
     
 0.549
LOC109006687
Chloride channel protein.
  
 
 
 0.537
LOC109011344
Vacuolar-processing enzyme.
   
  
 0.525
LOC109006626
Pentatricopeptide repeat-containing protein At2g17033.
      
 0.473
LOC108987611
BRI1 kinase inhibitor 1-like.
      
 0.405
LOC108992305
BRI1 kinase inhibitor 1-like.
      
 0.405
LOC108980766
Ammonium transporter.
      
 0.404
LOC109005854
Vacuole membrane protein KMS1-like.
      
 0.403
LOC109010447
Vacuole membrane protein KMS1-like.
      
 0.403
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.