STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109000681Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (434 aa)    
Predicted Functional Partners:
LOC108991826
Arogenate dehydrogenase 1, chloroplastic-like.
 
 
 0.979
LOC108983187
Histidinol-phosphate aminotransferase, chloroplastic isoform X1.
  
 
 0.966
LOC108986741
Histidinol-phosphate aminotransferase, chloroplastic-like.
  
 
 0.966
LOC108995634
Arogenate dehydrogenase 1, chloroplastic-like.
 
 
 0.964
LOC109011751
Chorismate mutase 2-like.
  
 
 0.892
LOC109012863
Probable aminotransferase TAT2.
  
 
 0.881
LOC109005560
Chorismate mutase.
  
 
 0.863
LOC109006316
Chorismate mutase.
  
 
 0.863
LOC108989204
Chorismate mutase.
  
 
 0.850
LOC109002890
Chorismate mutase.
  
 
 0.850
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.