STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109001584Cyclin-dependent kinase C-1-like isoform X1. (516 aa)    
Predicted Functional Partners:
LOC108991362
cyclin-T1-3; Belongs to the cyclin family.
    
 0.742
LOC108982325
cyclin-T1-5-like isoform X1; Belongs to the cyclin family.
    
 0.624
LOC109004738
cyclin-T1-4-like isoform X1; Belongs to the cyclin family.
    
 0.624
LOC109005862
cyclin-T1-5-like isoform X1; Belongs to the cyclin family.
    
 0.622
LOC109010454
cyclin-T1-5-like isoform X1; Belongs to the cyclin family.
    
 0.622
LOC109020969
Cyclin-dependent kinase D-3-like isoform X1; Belongs to the protein kinase superfamily.
  
 
0.594
LOC109003593
Cyclin-dependent kinase D-3-like; Belongs to the protein kinase superfamily.
  
 
0.592
LOC108986907
DNA damage-binding protein 1.
    
 
 0.586
LOC108989352
Transcription elongation factor SPT4 homolog 2-like isoform X1.
    
 0.556
LOC109014392
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.556
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.