STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109002663Oxysterol-binding protein-related protein 3C; Belongs to the OSBP family. (456 aa)    
Predicted Functional Partners:
LOC108988715
tRNA wybutosine-synthesizing protein 2/3/4.
      
 0.487
LOC108985350
Vesicle-associated protein 1-2-like.
    
 0.444
LOC108990710
Vesicle-associated protein 1-2-like isoform X2.
    
 0.444
LOC109011623
Vesicle-associated protein 1-1-like.
    
 0.444
LOC109015863
Vesicle-associated protein 1-2.
    
 0.444
LOC108979645
Vesicle-associated protein 4-2-like.
    
 0.435
LOC108987280
Vesicle-associated protein 4-2-like.
    
 0.435
LOC108990765
Vesicle-associated protein 1-3-like.
    
 0.435
LOC108993248
Vesicle-associated protein 4-1-like isoform X1.
    
 0.435
LOC108994382
Vesicle-associated protein 2-1-like isoform X1.
    
 0.435
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.