STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109003451Receptor like protein kinase S.2. (838 aa)    
Predicted Functional Partners:
LOC108979945
Tetrapyrrole-binding protein, chloroplastic.
    
 
 0.579
LOC108985857
Beta-1,6-galactosyltransferase GALT29A-like isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.562
LOC108984381
Protein LST8 homolog.
     
 0.561
LOC108996674
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC.
     
 0.538
LOC109010211
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
      
 0.514
LOC109013533
Mediator of RNA polymerase II transcription subunit 27.
      
 0.487
LOC108993954
Uncharacterized protein LOC108993954.
  
     0.471
LOC109009959
Uncharacterized membrane protein C776.05 isoform X1.
      
 0.471
LOC109012947
Uncharacterized protein LOC109012947.
  
     0.460
LOC108981469
Uncharacterized protein LOC108981469.
  
     0.456
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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