STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109003916Uncharacterized protein LOC109003916. (531 aa)    
Predicted Functional Partners:
LOC109017722
Uncharacterized protein LOC109017722.
  
     0.479
LOC109013373
Protection of telomeres protein 1c.
    
 0.444
LOC108983253
Uncharacterized protein LOC108983253.
  
     0.430
LOC109010310
Uncharacterized protein LOC109010310.
  
     0.415
LOC109017213
Protein ENHANCED DOWNY MILDEW 2-like.
  
     0.412
LOC109012372
F-box protein At3g12350.
  
     0.409
LOC108987546
Uncharacterized protein LOC108987546.
  
     0.405
LOC109006698
Uncharacterized protein LOC109006698.
  
     0.401
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.