STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109004317Uncharacterized protein LOC109004317. (85 aa)    
Predicted Functional Partners:
LOC108982919
Uncharacterized protein LOC108982919.
  
     0.512
LOC109021410
Uncharacterized protein LOC109021410.
  
     0.511
LOC109007386
Diphosphomevalonate decarboxylase MVD2-like.
  
     0.509
LOC109012820
DNA-binding protein S1FA-like.
  
    0.504
LOC108993408
Uncharacterized protein LOC108993408.
  
     0.501
LOC109011227
DNA-binding protein S1FA-like.
  
    0.496
LOC108998145
Uncharacterized protein LOC108998145 isoform X1.
  
     0.491
LOC109006767
Uncharacterized protein LOC109006767.
  
     0.487
LOC108983402
Uncharacterized protein LOC108983402 isoform X1; Belongs to the peptidase A1 family.
  
     0.484
LOC108992958
Uncharacterized protein LOC108992958.
  
     0.483
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.