STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109004354Uncharacterized protein LOC109004354. (160 aa)    
Predicted Functional Partners:
LOC109011252
Uncharacterized protein LOC109011252 isoform X1.
  
     0.488
LOC108987152
NAD(P)H-quinone oxidoreductase subunit S, chloroplastic.
  
     0.487
LOC108989841
Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic.
  
     0.452
LOC108984432
Lysophospholipid acyltransferase 1-like; Belongs to the membrane-bound acyltransferase family.
  
  
  0.434
LOC108999561
Uncharacterized protein LOC108999561.
  
     0.434
LOC108997125
Lysophospholipid acyltransferase 1-like; Belongs to the membrane-bound acyltransferase family.
  
  
  0.432
LOC108991878
Anaphase-promoting complex subunit 1.
     
 0.429
LOC108986466
Uncharacterized protein LOC108986466.
  
     0.422
LOC109012776
Protein CPR-5-like isoform X1.
  
     0.414
LOC109002556
Protein CPR-5-like isoform X1.
  
     0.407
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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